complexheatmap in r studio Search Results


prism v9.3.1  (GraphPad Software Inc)
90
GraphPad Software Inc prism v9.3.1
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Prism V9.3.1, supplied by GraphPad Software Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/prism v9.3.1/product/GraphPad Software Inc
Average 90 stars, based on 1 article reviews
prism v9.3.1 - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
complexheatmap package  (RStudio)
90
RStudio complexheatmap package
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Complexheatmap Package, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/complexheatmap package/product/RStudio
Average 90 stars, based on 1 article reviews
complexheatmap package - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
complexheatmap  (RStudio)
90
RStudio complexheatmap
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Complexheatmap, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/complexheatmap/product/RStudio
Average 90 stars, based on 1 article reviews
complexheatmap - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
complexheatmap in r studio  (RStudio)
90
RStudio complexheatmap in r studio
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Complexheatmap In R Studio, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/complexheatmap in r studio/product/RStudio
Average 90 stars, based on 1 article reviews
complexheatmap in r studio - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
complexheatmap suite  (RStudio)
90
RStudio complexheatmap suite
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Complexheatmap Suite, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/complexheatmap suite/product/RStudio
Average 90 stars, based on 1 article reviews
complexheatmap suite - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
complexheatmap r package  (RStudio)
90
RStudio complexheatmap r package
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Complexheatmap R Package, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/complexheatmap r package/product/RStudio
Average 90 stars, based on 1 article reviews
complexheatmap r package - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
pheatmap  (RStudio)
90
RStudio pheatmap
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Pheatmap, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/pheatmap/product/RStudio
Average 90 stars, based on 1 article reviews
pheatmap - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
ggplot2  (RStudio)
90
RStudio ggplot2
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Ggplot2, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ggplot2/product/RStudio
Average 90 stars, based on 1 article reviews
ggplot2 - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
complexheatmap v2.6.0 package  (RStudio)
90
RStudio complexheatmap v2.6.0 package
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Complexheatmap V2.6.0 Package, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/complexheatmap v2.6.0 package/product/RStudio
Average 90 stars, based on 1 article reviews
complexheatmap v2.6.0 package - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
complexheatmap 2.10.0  (RStudio)
90
RStudio complexheatmap 2.10.0
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Complexheatmap 2.10.0, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/complexheatmap 2.10.0/product/RStudio
Average 90 stars, based on 1 article reviews
complexheatmap 2.10.0 - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
ggsankey v.0.0.9999  (RStudio)
90
RStudio ggsankey v.0.0.9999
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Ggsankey V.0.0.9999, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ggsankey v.0.0.9999/product/RStudio
Average 90 stars, based on 1 article reviews
ggsankey v.0.0.9999 - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier

Image Search Results


Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism v9.3.1 and BioRender.com.

Journal: Scientific Reports

Article Title: Comparative transcriptional analysis identifies genes associated with the attenuation of Theileria parva infected cells after long-term in vitro culture

doi: 10.1038/s41598-024-59197-y

Figure Lengend Snippet: Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism v9.3.1 and BioRender.com.

Article Snippet: Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism v9.3.1 and BioRender.com.

Techniques: Expressing, Infection, Transformation Assay

Expression of Theileria parva genes in different states of T. parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes day 69 compared to day 7, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and -log(adjusted p-value) at day 69 compared to day 7. ( e ) Expression of the all significantly DEGs at day 69 compared to day 7, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism v9.3.1 and BioRender.com.

Journal: Scientific Reports

Article Title: Comparative transcriptional analysis identifies genes associated with the attenuation of Theileria parva infected cells after long-term in vitro culture

doi: 10.1038/s41598-024-59197-y

Figure Lengend Snippet: Expression of Theileria parva genes in different states of T. parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes day 69 compared to day 7, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and -log(adjusted p-value) at day 69 compared to day 7. ( e ) Expression of the all significantly DEGs at day 69 compared to day 7, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism v9.3.1 and BioRender.com.

Article Snippet: Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism v9.3.1 and BioRender.com.

Techniques: Expressing, Infection, Transformation Assay